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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4506212 chr8:10155784 A/G SGK223 chr8:8175258-8244008:- 0.33 6.36 4.74E-10 Box Plot
THCA rs4507728 chr8:10851455 C/T SGK223 chr8:8175258-8244008:- -0.39 -7.07 5.47E-12 Box Plot
THCA rs4508504 chr18:6602284 A/C GPR19 chr12:12813825-12849141:- 0.26 6 3.82E-9 Box Plot
THCA rs4509113 chr6:27013722 G/C ZNF322B chr9:99957633-99961910:- 0.45 7.97 1.2E-14 Box Plot
THCA rs4509797 chr11:77263203 C/T INTS4L1 chr7:64601603-64694600:+ -0.47 -7.4 6.0E-13 Box Plot
THCA rs4511144 chr1:121194112 G/C NBPF14 chr1:148003642-148025863:- -0.38 -8.42 4.58E-16 Box Plot
THCA rs4512344 chr8:11078781 A/C SGK223 chr8:8175258-8244008:- 0.53 10.21 2.85E-22 Box Plot
THCA rs4514720 chr17:36441093 C/T TBC1D3B chr17:34493061-34503996:- -0.48 -7.42 5.25E-13 Box Plot
THCA rs4515509 chr8:11172123 A/T SGK223 chr8:8175258-8244008:- -0.33 -6.07 2.68E-9 Box Plot
THCA rs4515883 chr10:88943267 T/C FAM35B chr10:46897641-46939143:+ 0.28 6.03 3.38E-9 Box Plot
THCA rs4516428 chr2:113072895 G/C RGPD5 chr2:110550335-110615272:+ -0.47 -6.88 1.86E-11 Box Plot
THCA rs4518411 chr5:46015430 T/C LOC647121 chr1:121260910-121313686:+ 0.31 5.94 5.39E-9 Box Plot
THCA rs4522649 chr2:132201468 G/A CCDC74B chr2:130896860-130902707:- 0.4 6.87 1.96E-11 Box Plot
THCA rs4523214 chr8:10970773 T/A SGK223 chr8:8175258-8244008:- 0.5 9.85 5.82E-21 Box Plot
THCA rs4526366 chr8:9890179 C/G SGK223 chr8:8175258-8244008:- 0.39 7 8.7E-12 Box Plot